Welcome to SOFA’s documentation!

API:

• SOFA
• plots
• tools

Tutorials:

• Installation
• Analysis of DepMap data
  • Introduction
  • Read data and set hyperparameters
  • Fit the SOFA model
  • Downstream analysis
• Analysis of a single-cell multiome data set
  • Introduction
  • Load and preprocess
  • Fit the SOFA model
  • Downstream analysis