Index

C

calc_rmse() (in module sofa.utils.utils)

calc_var_explained() (in module sofa.utils.utils) calc_var_explained_() (in module sofa.utils.utils)

F

fit() (sofa.models.SOFA.SOFA method)

G

get_ad() (in module sofa.utils.utils) get_factors() (in module sofa.utils.utils) get_gsea_enrichment() (in module sofa.utils.utils) get_guide_error() (in module sofa.utils.utils)

get_loadings() (in module sofa.utils.utils) get_rmse() (in module sofa.utils.utils) get_top_loadings() (in module sofa.utils.utils) get_var_explained_per_view_factor() (in module sofa.utils.utils)

L

load_model() (in module sofa.utils.utils)

M

module sofa.models.SOFA sofa.plots.plots sofa.utils.utils

P

plot_enrichment() (in module sofa.plots.plots) plot_factor_metadata_cor() (in module sofa.plots.plots) plot_fit() (in module sofa.plots.plots) plot_loadings() (in module sofa.plots.plots)

plot_top_loadings() (in module sofa.plots.plots) plot_variance_explained() (in module sofa.plots.plots) plot_variance_explained_factor() (in module sofa.plots.plots) plot_variance_explained_view() (in module sofa.plots.plots) predict() (sofa.models.SOFA.SOFA method)

S

save_model() (in module sofa.utils.utils) SOFA (class in sofa.models.SOFA) sofa.models.SOFA module

sofa.plots.plots module sofa.utils.utils module